Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGCCAGG
..((((((((....(((((...&))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139343
GeneSymbolBIN1
Binding site1630,1644
Score0.846
Seed1
Au0.294
Energy-23.5
Binding len14
Me-13.275
Phylopstem4.9108275
Phylopflank4.47120153875
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure