Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&.)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144508
GeneSymbolKNL1
Binding site7990,8043
Score0.846
Seed1
Au0.382
Energy-27.3
Binding len22
Me-10.109
Phylopstem0.09655136363636364
Phylopflank0.10669012674999999
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure