Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTATATTGTTTGCAGGTT
((((.(((.((((((((((...&)))))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_144563
GeneSymbolRPIA
Binding site1772,1791
Score0.962
Seed0
Au0.607
Energy-17.4
Binding len19
Me-9.113
Phylopstem0.59250361
Phylopflank1.1306710928409094
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure