Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCACCTGGAGGGAAGACCAGCGA
(.(((((((((((((((((...&)))))...))))))).).)))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144570
GeneSymbolJPT2
Binding site287,312
Score0.846
Seed1
Au0.426
Energy-21.4
Binding len25
Me-5.101
Phylopstem4.117604863636364
Phylopflank2.0861749092500004
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure