Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCTGGCAACGGCGACCGCCTCTGCTTCAATGTGGGCCGGGA
.((((((.((((..(((((...&.))))).....)))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_144574
GeneSymbolWDR20
Binding site199,242
Score0.846
Seed1
Au0.412
Energy-18.9
Binding len23
Me-8.253
Phylopstem5.633101666666666
Phylopflank6.474996662499999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure