Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCAGGCTGGAGTGCAGTGG
((((((((((..((((((((..&))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144597
GeneSymbolC15orf40
Binding site7212,7234
Score0.846
Seed1
Au0.412
Energy-28.3
Binding len22
Me-10.109
Phylopstem-0.04745437272727275
Phylopflank-0.22247339000000008
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure