Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&.)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144598
GeneSymbolLRRC28
Binding site2210,2243
Score0.846
Seed1
Au0.324
Energy-27.3
Binding len22
Me-10.109
Phylopstem-0.044402472727272733
Phylopflank0.06271340847500004
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure