Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGCATGAGCCAGG
..(((((((..((((((((...&))))))))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144599
GeneSymbolNIPA1
Binding site5482,5501
Score0.923
Seed1
Au0.559
Energy-26.1
Binding len19
Me-9.024
Phylopstem0.5027243625
Phylopflank0.3838929499999999
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure