Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAAGAGGGGAGAGAGTACTCCGGTGG
(((((((((((((((((((...&))))))).))))))..........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144599
GeneSymbolNIPA1
Binding site4682,4713
Score0.846
Seed1
Au0.382
Energy-26.1
Binding len31
Me-3.938
Phylopstem-0.3556692933333333
Phylopflank-0.3174078675
Longest consecutive pairings7
Position of longest consecutive pairings24
Pairings in 3prime end5
Position3UTR
2D Structure