Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTAGAAACACCAGCTCAGCATGGCAGCAGTGCGGAGGCCAGG
..(((((((((((((((((((.&))))))))))).........................)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144613
GeneSymbolCOX6B2
Binding site1036,1082
Score0.885
Seed1
Au0.412
Energy-25.4
Binding len46
Me-4.957
Phylopstem-0.04519393555555556
Phylopflank-0.13086701250000005
Longest consecutive pairings11
Position of longest consecutive pairings35
Pairings in 3prime end7
Position3UTR
2D Structure