Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTTCCTTTGCTTCAGGCAGCTGTC
..((((((((.(..((((((.&.))))))..)..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047422800
GeneSymbolRNF38
Binding site2493,2522
Score0.923
Seed1
Au0.544
Energy-21.2
Binding len21
Me-9.928
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure