Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGGGTGGAATTTCCTTTATTAAAAGGGTTTC
(((((((.((.((((((((..&)))))))).)).)................)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_144628
GeneSymbolTBC1D20
Binding site1399,1435
Score0.923
Seed1
Au0.574
Energy-22.3
Binding len36
Me-9.076
Phylopstem-0.5812327500000001
Phylopflank-0.030490403500000002
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end6
Position3UTR
2D Structure