Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATGCTTTGCAGGCCATCTACTTTGTATGCTCGGGC
.((((((((((((.((((((..&.)))))).)))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_144633
GeneSymbolKCNH8
Binding site1956,1992
Score0.885
Seed1
Au0.5
Energy-24.8
Binding len22
Me-4.65
Phylopstem5.366400153846154
Phylopflank5.5296754725
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure