Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTATGGAGAGTGCCAGGA
.((((((((.............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_144638
GeneSymbolTMEM42
Binding site371,390
Score0.923
Seed1
Au0.426
Energy-15.2
Binding len10
Me-14.322
Phylopstem2.7518161250000004
Phylopflank2.096952
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure