Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGCCTTGGGATGTCATGTGG
(((((((((((..((((((...&))))))....)))).)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144638
GeneSymbolTMEM42
Binding site536,560
Score0.846
Seed1
Au0.456
Energy-22.2
Binding len24
Me-8.574
Phylopstem-0.32233742307692304
Phylopflank-0.52440492875
Longest consecutive pairings6
Position of longest consecutive pairings18
Pairings in 3prime end5
Position3UTR
2D Structure