Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCTAGCGACTCAACAGAAGGCAGCCAATAGGTGG
((((((((((((((((((.(((&))))))))..........))))).)))))....))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144643
GeneSymbolSCLT1
Binding site2172,2209
Score0.923
Seed1
Au0.559
Energy-20.2
Binding len37
Me-3.938
Phylopstem0.7341158787878788
Phylopflank2.1657620074999997
Longest consecutive pairings8
Position of longest consecutive pairings29
Pairings in 3prime end7
PositionCDS
2D Structure