Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCAAGGAGAAGGAGACGACACATTTGAAAACCTAGTA
.((((((((((((((.((((((&))))))..))))).)))).................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144643
GeneSymbolSCLT1
Binding site545,586
Score0.808
Seed1
Au0.588
Energy-19.5
Binding len41
Me-4.026
Phylopstem2.7326329462500003
Phylopflank2.424101355
Longest consecutive pairings6
Position of longest consecutive pairings35
Pairings in 3prime end7
PositionCDS
2D Structure