Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACAGTGTGCACAGGA
.((((((((((..(((((....&))))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_144657
GeneSymbolHDX
Binding site214,231
Score0.923
Seed1
Au0.588
Energy-17.3
Binding len17
Me-8.429
Phylopstem0.5307498454545455
Phylopflank0.7617958337500002
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure