Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGGTGGTGGGA
....(((((.(((..((((((&))))))))).))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_144657
GeneSymbolHDX
Binding site5498,5514
Score1.0
Seed0
Au0.515
Energy-21.0
Binding len16
Me-12.381
Phylopstem2.3068576666666667
Phylopflank2.68495018625
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure