Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTGCATGTGCACAAATTCTTCCATCATTGCCAGC
..(((((((((.((((((((((&)))))))))))))..................)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_144658
GeneSymbolDOCK11
Binding site2628,2666
Score0.846
Seed1
Au0.559
Energy-18.3
Binding len38
Me-8.304
Phylopstem4.1935096000000005
Phylopflank3.8030098597500004
Longest consecutive pairings13
Position of longest consecutive pairings25
Pairings in 3prime end8
PositionCDS
2D Structure