Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACGTGACAGAACAGACTGAATTTAGCTAGGGAGGCAGTGA
(((((.((((((((((.(((((&)))))....))))).................))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144660
GeneSymbolSAMD8
Binding site3344,3387
Score0.846
Seed0
Au0.559
Energy-22.4
Binding len43
Me-5.839
Phylopstem0.2573462766666667
Phylopflank0.324801512625
Longest consecutive pairings5
Position of longest consecutive pairings38
Pairings in 3prime end7
Position3UTR
2D Structure