Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTGTGGGCCAGGG
.((((((.((((..(((((...&))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_144666
GeneSymbolDNHD1
Binding site8618,8635
Score1.0
Seed1
Au0.412
Energy-20.6
Binding len17
Me-8.253
Phylopstem-0.4641556666666667
Phylopflank0.82131675625
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure