Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAGCAGGTTCCCCCAGGGAGGGGAGGCCACCAGCTGA
((((((((((((((((((....&.))))))))))))......)))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144671
GeneSymbolPHETA1
Binding site1986,2025
Score0.808
Seed1
Au0.338
Energy-24.7
Binding len27
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings14
Pairings in 3prime end4
Position3UTR
2D Structure