Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGAAACAGCAGGAGAGAGAAGAAACAGGCCAGCTGT
(((((((((((((((((((((.&)))))))))).....))))..............))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144673
GeneSymbolCMTM2
Binding site77,119
Score0.846
Seed1
Au0.456
Energy-25.7
Binding len42
Me-3.938
Phylopstem0.12171953902439026
Phylopflank0.19576439725
Longest consecutive pairings10
Position of longest consecutive pairings32
Pairings in 3prime end7
Position5UTR
2D Structure