Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCCGGCAACTGCCATCTGGATGCCCAGAAGCTGAGGAGCCAGC
..((((((((((((((((((..&.))))))))....)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144688
GeneSymbolKASH5
Binding site555,599
Score1.0
Seed1
Au0.382
Energy-31.5
Binding len24
Me-4.957
Phylopstem1.9988174045454548
Phylopflank1.8048640149999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure