Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACCCTATTAACGGAGTATGTTCTGTGTGCCAGGC
.(((((((((((..........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_144693
GeneSymbolZNF558
Binding site5305,5341
Score0.846
Seed1
Au0.574
Energy-20.5
Binding len13
Me-6.908
Phylopstem0.24441418181818186
Phylopflank1.1692358299999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure