Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCGGCGCTTTTGGCCCCGCGGGAGGGGCCGGG
..((((((((((((.((((...&.))))...)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144693
GeneSymbolZNF558
Binding site60,92
Score1.0
Seed1
Au0.353
Energy-27.4
Binding len21
Me-5.692
Phylopstem0.18437452499999998
Phylopflank0.24900620624999997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure