Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTGGTGAAGAACCTGGAGGCGGTGG
(((((.((((.((((((((((.&)))))).....))))...)))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144699
GeneSymbolATP1A4
Binding site1526,1555
Score0.846
Seed0
Au0.353
Energy-24.6
Binding len29
Me-8.663
Phylopstem6.058754533333333
Phylopflank5.0264858075
Longest consecutive pairings6
Position of longest consecutive pairings23
Pairings in 3prime end7
PositionCDS
2D Structure