Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGGCTTAAGATCCCTATCAGCAAGGTCGATGCCAGTGC
(((((((((((((((((((((.&))))))))..................))))..)).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144699
GeneSymbolATP1A4
Binding site2389,2432
Score0.846
Seed1
Au0.441
Energy-23.8
Binding len43
Me-3.938
Phylopstem1.9786485809523817
Phylopflank3.48183808
Longest consecutive pairings8
Position of longest consecutive pairings35
Pairings in 3prime end7
PositionCDS
2D Structure