Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCTCAGAACTGAAGGAGTTATTAAACCCAGTGC
((((((((((((((((((.((.&)))))))))....))))).........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047422867
GeneSymbolSHOC1
Binding site854,888
Score0.923
Seed1
Au0.647
Energy-21.5
Binding len34
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end6
PositionCDS
2D Structure