Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCTGGAGGAAATAAATCAGGAAAGGGGAACAGA
..(((.(((((((((((((...&))))................)))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047422867
GeneSymbolSHOC1
Binding site1967,2002
Score0.846
Seed0
Au0.618
Energy-18.5
Binding len35
Me-6.858
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure