Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGAAAGGGAAAAACAGGAAGGCTTGGAGAAACTTGCCAGTGA
(((((((((((((((((((...&))))))))))))..........................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144719
GeneSymbolCCDC13
Binding site1039,1085
Score0.821
Seed1
Au0.5
Energy-26.8
Binding len46
Me-3.938
Phylopstem-0.17049926222222228
Phylopflank0.03525201624999999
Longest consecutive pairings12
Position of longest consecutive pairings34
Pairings in 3prime end5
PositionCDS
2D Structure