Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGAGCCAGTCTGCGGGAACAGCCAGTGA
(((((((((((((((((((...&)))))))).........))))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144719
GeneSymbolCCDC13
Binding site939,971
Score0.821
Seed1
Au0.382
Energy-26.3
Binding len32
Me-3.938
Phylopstem-0.3246723096774193
Phylopflank-0.15208203375
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end5
PositionCDS
2D Structure