Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTGCTGAGGTGTCAGGC
.((((((((.....(((((((.&)))))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_144720
GeneSymbolJAKMIP1
Binding site2025,2045
Score0.846
Seed1
Au0.5
Energy-19.7
Binding len20
Me-13.353
Phylopstem3.1116537750000006
Phylopflank3.3763353137500003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure