Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGAGAGGAGGCTGACCTGCGCTTCTGCCAGCTGA
((((((((((((((.((((...&))))))))))).................))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144720
GeneSymbolJAKMIP1
Binding site1881,1918
Score0.846
Seed1
Au0.294
Energy-22.4
Binding len37
Me-4.673
Phylopstem3.2684026687500003
Phylopflank3.4861101837499993
Longest consecutive pairings11
Position of longest consecutive pairings26
Pairings in 3prime end4
PositionCDS
2D Structure