Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGATTAACCGGCTGATGCGGCAGTCCCAGCAGGAGCGCAGG
..(((((((((..(((((....&.))))).)))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144722
GeneSymbolSPEF2
Binding site1134,1176
Score0.923
Seed1
Au0.397
Energy-23.0
Binding len18
Me-9.593
Phylopstem3.2600878
Phylopflank4.278173469999999
Longest consecutive pairings6
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure