Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCGCGGCGGCAGC
((((.((((((((((......&)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047422877
GeneSymbolPOU2F1
Binding site49,65
Score0.846
Seed0
Au0.441
Energy-23.3
Binding len16
Me-8.29
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end2
PositionCDS
2D Structure