Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGAAGGCCCAGTACTACCTGTACCGGGCCAAGAGCCGGC
..((((((((((((((((....&))))))))).........................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144965
GeneSymbolTTC16
Binding site1376,1418
Score0.923
Seed1
Au0.382
Energy-23.2
Binding len42
Me-4.957
Phylopstem1.7658515292682928
Phylopflank2.06232185125
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end4
PositionCDS
2D Structure