Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGA
(((((((((((((((((((((.&))))))...)))))))..........)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144970
GeneSymbolCXorf38
Binding site2775,2811
Score0.923
Seed1
Au0.426
Energy-24.7
Binding len36
Me-3.938
Phylopstem-0.05467377428571428
Phylopflank-0.08471782499999998
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end7
Position3UTR
2D Structure