Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTGCATTGTCAGGTG
((((((((....((((((((..&)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_144974
GeneSymbolCCDC122
Binding site1015,1032
Score0.846
Seed1
Au0.588
Energy-16.9
Binding len17
Me-12.408
Phylopstem1.720127625
Phylopflank3.02169857
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure