Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGACTTTAGGAGGCCAAGGTGG
((((((((((((((((((....&)))))))....))))).)))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144975
GeneSymbolSLFN5
Binding site4338,4364
Score1.0
Seed1
Au0.485
Energy-22.7
Binding len26
Me-3.938
Phylopstem0.034749640000000005
Phylopflank0.06727233750000002
Longest consecutive pairings7
Position of longest consecutive pairings19
Pairings in 3prime end4
Position3UTR
2D Structure