Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGCCTACTGAGCTGAAACACAG&CTGTAGAAGGTATTGGAACTTTTGGAATGTTTCAGTTCAGGTAAGGTAA
(((((.(((((((((((((...&.)))))))))))))...))))).
Details
MiRNAhsa-miR-24-2-5p
RefseqIDNM_144978
GeneSymbolCCDC138
Binding site2199,2248
Score0.815
Seed0
Au0.676
Energy-24.6
Binding len23
Me-5.839
Phylopstem-0.3256317615384615
Phylopflank0.4041069424999999
Longest consecutive pairings13
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure