Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TATCCAGTAAAGGACTCCTGTC
.((.((.(((((((((((((..&))))))).))))))..)).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144978
GeneSymbolCCDC138
Binding site1682,1704
Score0.923
Seed0
Au0.662
Energy-18.3
Binding len22
Me-8.369
Phylopstem1.9981965714285717
Phylopflank2.4472671675000006
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure