Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGCAAAGGCTGCAGTGAGCCAA
...((((((((((((((((...&)))))))))).............)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_144984
GeneSymbolVSTM4
Binding site2120,2150
Score0.846
Seed0
Au0.412
Energy-23.2
Binding len30
Me-6.515
Phylopstem0.9763136137931032
Phylopflank1.1515747224749997
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end5
Position3UTR
2D Structure