Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAGAGTGCTGGGC
.((((((((....((((((...&))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_145012
GeneSymbolCCNY
Binding site2445,2462
Score0.846
Seed1
Au0.412
Energy-17.7
Binding len17
Me-12.497
Phylopstem0.6244660175
Phylopflank0.41346007475000013
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure