Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTTTCACCACGTTGGCCAGGC
.((((((...((((((......&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_145012
GeneSymbolCCNY
Binding site4870,4893
Score0.846
Seed1
Au0.515
Energy-16.3
Binding len14
Me-8.406
Phylopstem-0.2786352
Phylopflank-0.09253939375
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure