Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCTGA
...(((((((((..((.(((.&.))).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047423030
GeneSymbolKDM4C
Binding site1060,1097
Score0.991
Seed0
Au0.471
Energy-20.8
Binding len18
Me-8.661
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure