Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTACTACTTCTGCTGCTGCT
..(((((.((((..(((.(((&)))..)))..)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047423030
GeneSymbolKDM4C
Binding site1860,1881
Score0.846
Seed0
Au0.574
Energy-18.8
Binding len21
Me-9.417
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure