Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCCCGAGAGGGGCTGACACTTTAGCTCCCGGTGCAGGTGA
((((((((((((((.((((...&))))..)))))))))).....................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145057
GeneSymbolCDC42EP5
Binding site195,237
Score1.0
Seed1
Au0.338
Energy-22.5
Binding len42
Me-4.673
Phylopstem0.9060870914285714
Phylopflank0.34595082849999986
Longest consecutive pairings10
Position of longest consecutive pairings26
Pairings in 3prime end4
Position5UTR
2D Structure