Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTCAGGAGAATTGCTTGAACCTAGGAGGTGGAGGTTGCAGTGA
(((((.(((((((((((((((.&))))))))))).....................))))....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145060
GeneSymbolSKA1
Binding site1890,1936
Score1.0
Seed0
Au0.441
Energy-21.2
Binding len46
Me-5.839
Phylopstem-0.054034750000000034
Phylopflank-0.11491813999999999
Longest consecutive pairings11
Position of longest consecutive pairings35
Pairings in 3prime end7
Position3UTR
2D Structure